EU Procure

Replacing genome variant annotation, filtering and interpretation software

Closed

Replacing genome variant annotation, filtering and interpretation software

Buyer
Stichting Amsterdam UMC
CPV
48180000 — Medical software package
Region
Netherlands
Procedure
open
Published
Jun 2, 2026
Deadline
8 Jun 2026, 10:00

Description

Data from the sequencer is processed through a bioinformatics pipeline (currently GATK, soon transitioning to DRAGEN), which outputs all possible variants relative to the reference genome in tabular form in a VCF file. This VCF file is imported into the software, where annotation first takes place: all valid variants are separated from invalid variants based on quality parameters. Because this results in a large number of variants, they are subsequently filtered based on laboratory defined cri...

Full record

Full tender details

Estimated value, full description, lots and export (CSV/JSON) — plus an alert for similar tenders.

Get access at launch

About this buyer

Stichting Amsterdam UMC published 22 tenders in the last 12 months. Median estimated value across the 8 with a published figure is about €2 400 000.

View all tenders from this buyer

Similar tenders

Source: original notice on TED.